Package: tteICE 1.1.5

Yi Zhou
tteICE: Treatment Effect Estimation for Time-to-Event Data with Intercurrent Events
Analysis of treatment effects in clinical trials with time-to-event outcomes is complicated by intercurrent events. This package implements methods for estimating and inferring the cumulative incidence functions for time-to-event (TTE) outcomes with intercurrent events (ICE) under the five strategies outlined in the ICH E9 (R1) addendum, see Deng (2025) <doi:10.1002/sim.70091>. This package can be used for analyzing data from both randomized controlled trials and observational studies. In general, the data involve a primary outcome event and, potentially, an intercurrent event. Two data structures are allowed: competing risks, where only the time to the first event is recorded, and semicompeting risks, where the times to both the primary outcome event and intercurrent event (or censoring) are recorded. For estimation methods, users can choose nonparametric estimation (which does not use covariates) and semiparametrically efficient estimation.
Authors:
tteICE_1.1.5.tar.gz
tteICE_1.1.5.zip(r-4.7-any)tteICE_1.1.5.zip(r-4.6-any)tteICE_1.1.5.zip(r-4.5-any)
tteICE_1.1.5.tgz(r-4.6-any)tteICE_1.1.5.tgz(r-4.5-any)
tteICE_1.1.5.tar.gz(r-4.7-any)tteICE_1.1.5.tar.gz(r-4.6-any)
tteICE_1.1.5.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
tteICE/json (API)
| # Install 'tteICE' in R: |
| install.packages('tteICE', repos = c('https://mephas.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/mephas/tteice/issues
Pkgdown/docs site:https://mephas.github.io
- bmt - Data from Section 1.3 of Klein and Moeschberger
Last updated from:7b24f1f48a. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 137 | ||
| source / vignettes | OK | 189 | ||
| linux-release | OK | 154 | ||
| macos-release | OK | 199 | ||
| macos-oldrel | OK | 210 | ||
| windows-devel | OK | 87 | ||
| windows-release | OK | 107 | ||
| windows-oldrel | OK | 103 | ||
| wasm-release | OK | 105 |
Exports:bshazscr.tteICEsurv.HRsurv.tteICEtteICEtteICEShinyzph
Dependencies:base64encbslibcachemclicmprskcommonmarkcrosstalkdigestDTevaluatefastmapfontawesomefsglueGPArotationhighrhtmltoolshtmlwidgetshttpuvjquerylibjsonliteknitrlaterlatticelazyevallifecyclemagrittrMASSMatrixmemoisemimemnormtnlmeotelpromisespsychR6rappdirsRcpprlangrmarkdownsassshinyshinythemesshinyWidgetssourcetoolssurvivaltinytexwithrxfunxtableyaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| tteICE: Treatment Effect Estimation for Time-to-Event Data with Intercurrent Events | tteICE-package |
| Data from Section 1.3 of Klein and Moeschberger (1997) | bmt |
| Baseline hazards of 'tteICE' objects | bshaz.tteICE |
| Coefficients of 'tteICE' objects | coef.tteICE |
| Plot method for 'tteICE' objects | plot.tteICE |
| Predict method for 'tteICE' objects at specific time points | predict.tteICE |
| Print the summary of 'tteICE' | print.summary.tteICE |
| Print method for 'tteICE' objects | print.tteICE |
| Fit CIFs for semicompeting risks time-to-event data with intercurrent events. | scr.tteICE |
| Summary method for 'tteICE' objects | summary.tteICE |
| Estimate hazard ratios | surv.HR |
| Fit CIFs for competing risks time-to-event data with intercurrent events. | surv.tteICE |
| Use formula to fit CIFs for time-to-event data with intercurrent events | tteICE |
| Shiny app for tteICE | tteICEShiny |
| Checking proportional hazards of 'tteICE' objects | zph.tteICE |
